==================== Entrez PubMed Results ======================

1:Groth AC, Calos MP. Related Articles, Books, LinkOut

Phage integrases: biology and applications.J Mol Biol. 2004 Jan 16;335(3):667-78. Review. PMID: 14687564 [PubMed - indexed for MEDLINE]

2:Wang PW, Chu L, Guttman DS. Related Articles, Nucleotide, Protein, Books, LinkOut

Complete sequence and evolutionary genomic analysis of the Pseudomonas aeruginosa transposable bacteriophage D3112.J Bacteriol. 2004 Jan;186(2):400-10. PMID: 14702309 [PubMed - indexed for MEDLINE]

3:Pullinger GD, Bevir T, Lax AJ. Related Articles, Nucleotide, Protein, Books, LinkOut

The Pasteurella multocida toxin is encoded within a lysogenic bacteriophage.Mol Microbiol. 2004 Jan;51(1):255-69. PMID: 14651626 [PubMed - in process]

4:Smith HO, Hutchison CA 3rd, Pfannkoch C, Venter JC. Related Articles, Books, LinkOut

Generating a synthetic genome by whole genome assembly: phiX174 bacteriophage from synthetic oligonucleotides.Proc Natl Acad Sci U S A. 2003 Dec 23;100(26):15440-5. Epub 2003 Dec 02. PMID: 14657399 [PubMed - in process]

5:Siboo IR, Bensing BA, Sullam PM. Related Articles, Books, LinkOut

Genomic organization and molecular characterization of SM1, a temperate bacteriophage of Streptococcus mitis.J Bacteriol. 2003 Dec;185(23):6968-75. PMID: 14617660 [PubMed - indexed for MEDLINE]

6:Stromsten NJ, Benson SD, Burnett RM, Bamford DH, Bamford JK. Related Articles, Cited in PMC, Books, LinkOut

The Bacillus thuringiensis linear double-stranded DNA phage Bam35, which is highly similar to the Bacillus cereus linear plasmid pBClin15, has a prophage state.J Bacteriol. 2003 Dec;185(23):6985-9. PMID: 14617663 [PubMed - indexed for MEDLINE]

7:Ventura M, Canchaya C, Kleerebezem M, de Vos WM, Siezen RJ, Brussow H. Related Articles, Books, LinkOut

The prophage sequences of Lactobacillus plantarum strain WCFS1.Virology. 2003 Nov 25;316(2):245-55. PMID: 14644607 [PubMed - indexed for MEDLINE]

8:Seguritan V, Feng IW, Rohwer F, Swift M, Segall AM. Related Articles, Books, LinkOut

Genome sequences of two closely related Vibrio parahaemolyticus phages, VP16T and VP16C.J Bacteriol. 2003 Nov;185(21):6434-47. PMID: 14563879 [PubMed - indexed for MEDLINE]

9:Mmolawa PT, Schmieger H, Heuzenroeder MW. Related Articles, Cited in PMC, Books, LinkOut

Bacteriophage ST64B, a genetic mosaic of genes from diverse sources isolated from Salmonella enterica serovar typhimurium DT 64.J Bacteriol. 2003 Nov;185(21):6481-5. PMID: 14563886 [PubMed - indexed for MEDLINE]

10:Hendrix RW. Related Articles, Books, LinkOut

Bacteriophage genomics.Curr Opin Microbiol. 2003 Oct;6(5):506-11. Review. PMID: 14572544 [PubMed - indexed for MEDLINE]

11:Campos J, Martinez E, Suzarte E, Rodriguez BL, Marrero K, Silva Y, Ledon T, del Sol R, Fando R. Related Articles, Books, LinkOut

VGJ phi, a novel filamentous phage of Vibrio cholerae, integrates into the same chromosomal site as CTX phi.J Bacteriol. 2003 Oct;185(19):5685-96. PMID: 13129939 [PubMed - indexed for MEDLINE]

12:Garcia E, Elliott JM, Ramanculov E, Chain PS, Chu MC, Molineux IJ. Related Articles, Gene, Nucleotide, Protein, Genome, Books, LinkOut

The genome sequence of Yersinia pestis bacteriophage phiA1122 reveals an intimate history with the coliphage T3 and T7 genomes.J Bacteriol. 2003 Sep;185(17):5248-62. PMID: 12923098 [PubMed - indexed for MEDLINE]

13:Miller ES, Heidelberg JF, Eisen JA, Nelson WC, Durkin AS, Ciecko A, Feldblyum TV, White O, Paulsen IT, Nierman WC, Lee J, Szczypinski B, Fraser CM. Related Articles, Gene, Nucleotide, Protein, Genome, Books, LinkOut

Complete genome sequence of the broad-host-range vibriophage KVP40: comparative genomics of a T4-related bacteriophage.J Bacteriol. 2003 Sep;185(17):5220-33. PMID: 12923095 [PubMed - indexed for MEDLINE]

14:Bull JJ, Badgett MR, Rokyta D, Molineux IJ. Related Articles, Books, LinkOut

Experimental evolution yields hundreds of mutations in a functional viral genome.J Mol Evol. 2003 Sep;57(3):241-8. PMID: 14629033 [PubMed - in process]

15:Papke RT, Doolittle WF. Related Articles, Books, LinkOut

Phage evolution: new worlds of genomic diversity.Curr Biol. 2003 Aug 5;13(15):R606-7. Review. PMID: 12906814 [PubMed - indexed for MEDLINE]

16:Canchaya C, Fournous G, Chibani-Chennoufi S, Dillmann ML, Brussow H. Related Articles, Books, LinkOut

Phage as agents of lateral gene transfer.Curr Opin Microbiol. 2003 Aug;6(4):417-24. Review. PMID: 12941415 [PubMed - indexed for MEDLINE]

17:Lavigne R, Burkal'tseva MV, Robben J, Sykilinda NN, Kurochkina LP, Grymonprez B, Jonckx B, Krylov VN, Mesyanzhinov VV, Volckaert G. Related Articles, Gene, Nucleotide, Protein, Genome, Books, LinkOut

The genome of bacteriophage phiKMV, a T7-like virus infecting Pseudomonas aeruginosa.Virology. 2003 Jul 20;312(1):49-59. PMID: 12890620 [PubMed - indexed for MEDLINE]

18:Yuzenkova J, Nechaev S, Berlin J, Rogulja D, Kuznedelov K, Inman R, Mushegian A, Severinov K. Related Articles, Gene, Nucleotide, Protein, Genome, Books, LinkOut

Genome of Xanthomonas oryzae bacteriophage Xp10: an odd T-odd phage.J Mol Biol. 2003 Jul 18;330(4):735-48. PMID: 12850143 [PubMed - indexed for MEDLINE]

19:Kovalyova IV, Kropinski AM. Related Articles, Gene, Nucleotide, Protein, Genome, Books, LinkOut

The complete genomic sequence of lytic bacteriophage gh-1 infecting Pseudomonas putida--evidence for close relationship to the T7 group.Virology. 2003 Jul 5;311(2):305-15. PMID: 12842620 [PubMed - indexed for MEDLINE]

20:Casjens S. Related Articles, Cited in PMC, Books, LinkOut

Prophages and bacterial genomics: what have we learned so far?Mol Microbiol. 2003 Jul;49(2):277-300. PMID: 12886937 [PubMed - in process]

21:Hardies SC, Comeau AM, Serwer P, Suttle CA. Related Articles, Gene, Nucleotide, Protein, Genome, Cited in PMC, Books, LinkOut

The complete sequence of marine bacteriophage VpV262 infecting vibrio parahaemolyticus indicates that an ancestral component of a T7 viral supergroup is widespread in the marine environment.Virology. 2003 Jun 5;310(2):359-71. PMID: 12781722 [PubMed - indexed for MEDLINE]

22:Garcia P, Ladero V, Suarez JE. Related Articles, Books, LinkOut

Analysis of the morphogenetic cluster and genome of the temperate Lactobacillus casei bacteriophage A2.Arch Virol. 2003 Jun;148(6):1051-70. PMID: 12756614 [PubMed - indexed for MEDLINE]

23:Nakagawa I, Kurokawa K, Yamashita A, Nakata M, Tomiyasu Y, Okahashi N, Kawabata S, Yamazaki K, Shiba T, Yasunaga T, Hayashi H, Hattori M, Hamada S. Related Articles, Gene, Nucleotide, Protein, Books, LinkOut

Genome sequence of an M3 strain of Streptococcus pyogenes reveals a large-scale genomic rearrangement in invasive strains and new insights into phage evolution.Genome Res. 2003 Jun;13(6A):1042-55. PMID: 12799345 [PubMed - indexed for MEDLINE]

24:Faruque SM, Zhu J, Asadulghani, Kamruzzaman M, Mekalanos JJ. Related Articles, Cited in PMC, Books, LinkOut

Examination of diverse toxin-coregulated pilus-positive Vibrio cholerae strains fails to demonstrate evidence for Vibrio pathogenicity island phage.Infect Immun. 2003 Jun;71(6):2993-9. PMID: 12761075 [PubMed - indexed for MEDLINE]

25:Allison HE, Sergeant MJ, James CE, Saunders JR, Smith DL, Sharp RJ, Marks TS, McCarthy AJ. Related Articles, Books, LinkOut

Immunity profiles of wild-type and recombinant shiga-like toxin-encoding bacteriophages and characterization of novel double lysogens.Infect Immun. 2003 Jun;71(6):3409-18. PMID: 12761125 [PubMed - indexed for MEDLINE]

26:Nelson D, Schuch R, Zhu S, Tscherne DM, Fischetti VA. Related Articles, Gene, Nucleotide, Protein, Genome, Books, LinkOut

Genomic sequence of C1, the first streptococcal phage.J Bacteriol. 2003 Jun;185(11):3325-32. PMID: 12754230 [PubMed - indexed for MEDLINE]

27:Mmolawa PT, Schmieger H, Tucker CP, Heuzenroeder MW. Related Articles, Gene, Nucleotide, Protein, Genome, Cited in PMC, Books, LinkOut

Genomic structure of the Salmonella enterica serovar Typhimurium DT 64 bacteriophage ST64T: evidence for modular genetic architecture.J Bacteriol. 2003 Jun;185(11):3473-5. PMID: 12754248 [PubMed - indexed for MEDLINE]

28:Canchaya C, Proux C, Fournous G, Bruttin A, Brussow H. Related Articles, Cited in PMC, Books, LinkOut

Prophage genomics.Microbiol Mol Biol Rev. 2003 Jun;67(2):238-76, table of contents. Review. Erratum in: Microbiol Mol Biol Rev. 2003 Sep;67(3):473. PMID: 12794192 [PubMed - indexed for MEDLINE]

29:Krylov VN. Related Articles, Books, LinkOut

[Role of horizontal gene transfer by bacteriophages in the origin of pathogenic bacteria]Genetika. 2003 May;39(5):595-620. Review. Russian. PMID: 12838609 [PubMed - indexed for MEDLINE]

30:Hertwig S, Klein I, Lurz R, Lanka E, Appel B. Related Articles, Cited in PMC, Books, LinkOut

PY54, a linear plasmid prophage of Yersinia enterocolitica with covalently closed ends.Mol Microbiol. 2003 May;48(4):989-1003. PMID: 12753191 [PubMed - indexed for MEDLINE]

31:Krisch HM. Related Articles, Books, LinkOut

The view from Les Treilles on the origins, evolution and diversity of viruses.Res Microbiol. 2003 May;154(4):227-9. No abstract available. PMID: 12901367 [PubMed - indexed for MEDLINE]

32:Desplats C, Krisch HM. Related Articles, Gene, Nucleotide, Protein, Genome, Books, LinkOut

The diversity and evolution of the T4-type bacteriophages.Res Microbiol. 2003 May;154(4):259-67. PMID: 12798230 [PubMed - indexed for MEDLINE]

33:Krylov V, Pleteneva E, Bourkaltseva M, Shaburova O, Volckaert G, Sykilinda N, Kurochkina L, Mesyanzhinov V. Related Articles, Books, LinkOut

Myoviridae bacteriophages of Pseudomonas aeruginosa: a long and complex evolutionary pathway.Res Microbiol. 2003 May;154(4):269-75. PMID: 12798231 [PubMed - indexed for MEDLINE]

34:Pedulla ML, Ford ME, Houtz JM, Karthikeyan T, Wadsworth C, Lewis JA, Jacobs-Sera D, Falbo J, Gross J, Pannunzio NR, Brucker W, Kumar V, Kandasamy J, Keenan L, Bardarov S, Kriakov J, Lawrence JG, Jacobs WR Jr, Hendrix RW, Hatfull GF. Related Articles, Gene, Nucleotide, Protein, Genome, Cited in PMC, Books, LinkOut

Origins of highly mosaic mycobacteriophage genomes.Cell. 2003 Apr 18;113(2):171-82. PMID: 12705866 [PubMed - indexed for MEDLINE]

35:Obregon V, Garcia JL, Garcia E, Lopez R, Garcia P. Related Articles, Gene, Nucleotide, Protein, Genome, Cited in PMC, Books, LinkOut

Genome organization and molecular analysis of the temperate bacteriophage MM1 of Streptococcus pneumoniae.J Bacteriol. 2003 Apr;185(7):2362-8. PMID: 12644508 [PubMed - indexed for MEDLINE]

36:Li M, Kotetishvili M, Chen Y, Sozhamannan S. Related Articles, Nucleotide, Protein, Cited in PMC, Books, LinkOut

Comparative genomic analyses of the vibrio pathogenicity island and cholera toxin prophage regions in nonepidemic serogroup strains of Vibrio cholerae.Appl Environ Microbiol. 2003 Mar;69(3):1728-38. PMID: 12620865 [PubMed - indexed for MEDLINE]

37:Hokanson CA, Dora E, Donahue BA, Rivkin M, Finer M, Mendez MJ. Related Articles, Books, LinkOut

Hybrid yeast-bacteria cloning system used to capture and modify adenoviral and nonviral genomes.Hum Gene Ther. 2003 Mar 1;14(4):329-39. PMID: 12659674 [PubMed - indexed for MEDLINE]

38:Miller ES, Kutter E, Mosig G, Arisaka F, Kunisawa T, Ruger W. Related Articles, Gene, Nucleotide, Protein, Genome, Cited in PMC, Books, LinkOut

Bacteriophage T4 genome.Microbiol Mol Biol Rev. 2003 Mar;67(1):86-156, table of contents. Review. PMID: 12626685 [PubMed - indexed for MEDLINE]

39:Vybiral D, Takac M, Loessner M, Witte A, von Ahsen U, Blasi U. Related Articles, Gene, Nucleotide, Protein, Genome, Books, LinkOut

Complete nucleotide sequence and molecular characterization of two lytic Staphylococcus aureus phages: 44AHJD and P68.FEMS Microbiol Lett. 2003 Feb 28;219(2):275-83. PMID: 12620632 [PubMed - indexed for MEDLINE]

40:Davis BM, Waldor MK. Related Articles, Cited in PMC, Books, LinkOut

Filamentous phages linked to virulence of Vibrio cholerae.Curr Opin Microbiol. 2003 Feb;6(1):35-42. Review. PMID: 12615217 [PubMed - indexed for MEDLINE]

41:Pedulla ML, Ford ME, Karthikeyan T, Houtz JM, Hendrix RW, Hatfull GF, Poteete AR, Gilcrease EB, Winn-Stapley DA, Casjens SR. Related Articles, Gene, Nucleotide, Protein, Cited in PMC, Books, LinkOut

Corrected sequence of the bacteriophage p22 genome.J Bacteriol. 2003 Feb;185(4):1475-7. PMID: 12562822 [PubMed - indexed for MEDLINE]

42:Hayashi Y, Sakata H, Makino Y, Urabe I, Yomo T. Related Articles, Books, LinkOut

Can an arbitrary sequence evolve towards acquiring a biological function?J Mol Evol. 2003 Feb;56(2):162-8. PMID: 12574862 [PubMed - indexed for MEDLINE]

43:Turner PE. Related Articles, Books, LinkOut

Searching for the advantages of virus sex.Orig Life Evol Biosph. 2003 Feb;33(1):95-108. PMID: 12967275 [PubMed - in process]

44:Vilen H, Aalto JM, Kassinen A, Paulin L, Savilahti H. Related Articles, Cited in PMC, Books, LinkOut

A direct transposon insertion tool for modification and functional analysis of viral genomes.J Virol. 2003 Jan;77(1):123-34. PMID: 12477817 [PubMed - indexed for MEDLINE]

45:Nandi S, Maiti D, Saha A, Bhadra RK. Related Articles, Books, LinkOut

Genesis of variants of Vibrio cholerae O1 biotype El Tor: role of the CTXphi array and its position in the genome.Microbiology. 2003 Jan;149(Pt 1):89-97. PMID: 12576583 [PubMed - indexed for MEDLINE]

46:Paul JH, Sullivan MB, Segall AM, Rohwer F. Related Articles, Books, LinkOut

Marine phage genomics.Comp Biochem Physiol B Biochem Mol Biol. 2002 Dec;133(4):463-76. Review. PMID: 12470812 [PubMed - indexed for MEDLINE]

Cre/lox: one more step in the taming of the genome.Endocrine. 2002 Dec;19(3):221-8. Review. PMID: 12624421 [PubMed - indexed for MEDLINE]

48:Kapfhammer D, Blass J, Evers S, Reidl J. Related Articles, Gene, Nucleotide, Protein, Genome, Books, LinkOut

Vibrio cholerae phage K139: complete genome sequence and comparative genomics of related phages.J Bacteriol. 2002 Dec;184(23):6592-601. PMID: 12426348 [PubMed - indexed for MEDLINE]

49:Burkal'tseva MV, Krylov VN, Pleteneva EA, Shaburova OV, Krylov SV, Volkart G, Sykilinda NN, Kurochkina LP, Mesianzhinov VV. Related Articles, Books, LinkOut

[Phenogenetic characterization of a group of giant Phi KZ-like bacteriophages of Pseudomonas aeruginosa]Genetika. 2002 Nov;38(11):1470-9. Russian. PMID: 12500672 [PubMed - indexed for MEDLINE]

50:Canchaya C, Desiere F, McShan WM, Ferretti JJ, Parkhill J, Brussow H. Related Articles, Cited in PMC, Books, LinkOut

Genome analysis of an inducible prophage and prophage remnants integrated in the Streptococcus pyogenes strain SF370.Virology. 2002 Oct 25;302(2):245-58. PMID: 12441069 [PubMed - indexed for MEDLINE]

51:Hendrix RW. Related Articles, Cited in PMC, Books, LinkOut

Bacteriophages: evolution of the majority.Theor Popul Biol. 2002 Jun;61(4):471-80. Review. PMID: 12167366 [PubMed - indexed for MEDLINE]

52:Desplats C, Dez C, Tetart F, Eleaume H, Krisch HM. Related Articles, Gene, Nucleotide, Protein, Genome, Cited in PMC, Books, LinkOut

Snapshot of the genome of the pseudo-T-even bacteriophage RB49.J Bacteriol. 2002 May;184(10):2789-804. PMID: 11976309 [PubMed - indexed for MEDLINE]

53:Brussow H, Hendrix RW. Related Articles, Cited in PMC, Books, LinkOut

Phage genomics: small is beautiful.Cell. 2002 Jan 11;108(1):13-6. Review. PMID: 11792317 [PubMed - indexed for MEDLINE]

54:Lawrence JG, Hendrix RW, Casjens S. Related Articles, Cited in PMC, Books, LinkOut

Where are the pseudogenes in bacterial genomes?Trends Microbiol. 2001 Nov;9(11):535-40. PMID: 11825713 [PubMed - indexed for MEDLINE]

55:Hambly E, Tetart F, Desplats C, Wilson WH, Krisch HM, Mann NH. Related Articles, Nucleotide, Protein, Free in PMC, Cited in PMC, Books, LinkOut

A conserved genetic module that encodes the major virion components in both the coliphage T4 and the marine cyanophage S-PM2.Proc Natl Acad Sci U S A. 2001 Sep 25;98(20):11411-6. Epub 2001 Sep 11. PMID: 11553768 [PubMed - indexed for MEDLINE]

56:Tetart F, Desplats C, Kutateladze M, Monod C, Ackermann HW, Krisch HM. Related Articles, Gene, Nucleotide, Protein, Genome, Cited in PMC, Books, LinkOut

Phylogeny of the major head and tail genes of the wide-ranging T4-type bacteriophages.J Bacteriol. 2001 Jan;183(1):358-66. PMID: 11114936 [PubMed - indexed for MEDLINE]

57:Mediavilla J, Jain S, Kriakov J, Ford ME, Duda RL, Jacobs WR Jr, Hendrix RW, Hatfull GF. Related Articles, Gene, Nucleotide, Protein, Genome, Cited in PMC, Books, LinkOut

Genome organization and characterization of mycobacteriophage Bxb1.Mol Microbiol. 2000 Dec;38(5):955-70. PMID: 11123671 [PubMed - indexed for MEDLINE]

58:Vander Byl C, Kropinski AM. Related Articles, Gene, Nucleotide, Protein, Genome, Cited in PMC, Books, LinkOut

Sequence of the genome of Salmonella bacteriophage P22.J Bacteriol. 2000 Nov;182(22):6472-81. PMID: 11053393 [PubMed - indexed for MEDLINE]

59:Kropinski AM. Related Articles, Gene, Nucleotide, Protein, Genome, Cited in PMC, Books, LinkOut

Sequence of the genome of the temperate, serotype-converting, Pseudomonas aeruginosa bacteriophage D3.J Bacteriol. 2000 Nov;182(21):6066-74. PMID: 11029426 [PubMed - indexed for MEDLINE]

60:Hendrix RW, Lawrence JG, Hatfull GF, Casjens S. Related Articles, Cited in PMC, Books, LinkOut

The origins and ongoing evolution of viruses.Trends Microbiol. 2000 Nov;8(11):504-8. Review. PMID: 11121760 [PubMed - indexed for MEDLINE]

61:Juhala RJ, Ford ME, Duda RL, Youlton A, Hatfull GF, Hendrix RW. Related Articles, Gene, Nucleotide, Protein, Genome, Cited in PMC, Books, LinkOut

Genomic sequences of bacteriophages HK97 and HK022: pervasive genetic mosaicism in the lambdoid bacteriophages.J Mol Biol. 2000 May 26;299(1):27-51. PMID: 10860721 [PubMed - indexed for MEDLINE]

62:Ravin V, Ravin N, Casjens S, Ford ME, Hatfull GF, Hendrix RW. Related Articles, Gene, Protein, Cited in PMC, Books, LinkOut

Genomic sequence and analysis of the atypical temperate bacteriophage N15.J Mol Biol. 2000 May 26;299(1):53-73. PMID: 10860722 [PubMed - indexed for MEDLINE]

63:Hendrix RW. Related Articles, Cited in PMC, Books, LinkOut

Evolution: the long evolutionary reach of viruses.Curr Biol. 1999 Dec 16-30;9(24):R914-7. Review. PMID: 10607585 [PubMed - indexed for MEDLINE]

64:Hendrix RW, Smith MC, Burns RN, Ford ME, Hatfull GF. Related Articles, Gene, Nucleotide, Protein, Genome, Free in PMC, Cited in PMC, Books, LinkOut

Evolutionary relationships among diverse bacteriophages and prophages: all the world's a phage.Proc Natl Acad Sci U S A. 1999 Mar 2;96(5):2192-7. PMID: 10051617 [PubMed - indexed for MEDLINE]

65:Weisberg RA, Gottesmann ME, Hendrix RW, Little JW. Related Articles, Cited in PMC, Books, LinkOut

Family values in the age of genomics: comparative analyses of temperate bacteriophage HK022.Annu Rev Genet. 1999;33:565-602. Review. PMID: 10690418 [PubMed - indexed for MEDLINE]

66:Ford ME, Sarkis GJ, Belanger AE, Hendrix RW, Hatfull GF. Related Articles, Gene, Nucleotide, Protein, Genome, Cited in PMC, Books, LinkOut

Genome structure of mycobacteriophage D29: implications for phage evolution.J Mol Biol. 1998 May 29;279(1):143-64. PMID: 9636706 [PubMed - indexed for MEDLINE]

67:Ford ME, Stenstrom C, Hendrix RW, Hatfull GF. Related Articles, Gene, Nucleotide, Protein, Genome, Cited in PMC, Books, LinkOut

Mycobacteriophage TM4: genome structure and gene expression.Tuber Lung Dis. 1998;79(2):63-73. PMID: 10645443 [PubMed - indexed for MEDLINE]